Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944888.1_cds_XP_016487584.1_78300
CDS Infomation

[gene=LOC107807671] [db_xref=GeneID:107807671] [protein=calcium-dependent protein kinase 17-like isoform X3] [protein_id=XP_016487584.1] [location=complement(join(33710..33811,34086..34185,34295..34422,35508..35623,35966..36118,36270..36410,37166..37768,38291..38387))] [gbkey=CDS]
Sequence

ATGGGGGGTTGTTGCTCAAAGGCAGAGTCTGATCCTGCACAAAATTCTAATGAAGAAATT
GCACAATCATATTCAAAACAAGGAGAATCACATGCAGGAAATCATGACATGCAAGGTTCC
ACCACACCATCAAAGATTCCACCTCATGCATCACCAAACCATTCATCAAAACCATCTAAA
GCAGCCCCAATAGGGCCAGTTTTAGGTAGGCCAATGGAGGACATAAAGGCAACATATACA
CTAGGAAAAGAGCTAGGAAGAGGTCAATTTGGTGTGACACATTTATGTACACATAAACAA
ACAGGAGAACAATTTGCATGCAAAACAATTGCCAAAAGAAAATTGGTAAATAAAGAGGAT
ATTGAGGATGTAAGAAGGGAAGTGCAAATAATGCACCATTTGACAGAACAACCAAATATT
GTGGAACTTAAAGGGGCATATGAGGACAAACATTCTGTGCATTTGGTTATGGAATTGTGT
GCTGGAGGTGAACTTTTTGATAGGATTATTGCTAAAGGACATTATACAGAAAGAGCAGCT
GCTTCATTGTTAAGAACAATTGTGCAAATTGTACATACTTGTCATTCAATGGGAGTTATT
CATAGAGATCTTAAACCTGAAAATTTCCTCCTCCTTAGCAAAGATGAAGATGCACCTCTC
AAAGCTACTGATTTTGGTCTTTCTGTGTTTTACAAGCAAGGAGATGTGTTTAAAGACATA
GTGGGCAGTGCATATTACATAGCACCTGAAGTGTTGAAGAGAAGATATGGTCCAGAAGTT
GATATTTGGAGTATTGGTGTTATGAATATTCTTCTTTGTGGTGTTCCTCCTTTTTGGGCA
GAATCTGAAAATGGAATATTTAATGCAATATTGAGGGGACATGTTGATTTTTCAAGTGAC
CCTTGGCCTTCAATTTCTTCTGGAGCGAAGGATCTTGTTAGGAAGATGTTAAATTCAGAC
CCAAGTCAGAGGTTGACAGCACTTCAAGTCCTAAATCATCCATGGATAAAGGAGGATGGA
GAAGCACCAGATACACCACTTGACAATGCTGTTCTCAATAAGCTCAAAAACTTTAGAGCT
ATGAACAAGTTCAAGAAAGTTGCTCTTCGGGCTGATGCTGATGGAAATGGGACAATTGAT
TATGAAGAATTCATCACAGCAACAATGCACATGAATAGAATGGACAGAGAAGAACATCTT
TACAAAGCTTTCCAATACTTTGATAAGGATAAAAGCGGGTATATTACAATGGAAGAGTTA
GAGCAGGCTTTACGAGAATTTGGTATGAATGATGCAAAGGATATAAAAGAAATTATCTCC
GAAGTTGACTCTGACAATGATGGTCGTATAAATTATGATGAGTTTGTTGCTATGATGAAG
AAGGGAAATCCAGAAGCAGCAAGAAATGCAAAGAAACGAAGGGAGGTTTTCGTCGAGTAA

Peptide Sequence

PEP ID

XP_016487584.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 17-like isoform X3 [Nicotiana tabacum]
Sequence

MGGCCSKAESDPAQNSNEEIAQSYSKQGESHAGNHDMQGSTTPSKIPPHASPNHSSKPSK
AAPIGPVLGRPMEDIKATYTLGKELGRGQFGVTHLCTHKQTGEQFACKTIAKRKLVNKED
IEDVRREVQIMHHLTEQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYTERAA
ASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLSKDEDAPLKATDFGLSVFYKQGDVFKDI
VGSAYYIAPEVLKRRYGPEVDIWSIGVMNILLCGVPPFWAESENGIFNAILRGHVDFSSD
PWPSISSGAKDLVRKMLNSDPSQRLTALQVLNHPWIKEDGEAPDTPLDNAVLNKLKNFRA
MNKFKKVALRADADGNGTIDYEEFITATMHMNRMDREEHLYKAFQYFDKDKSGYITMEEL
EQALREFGMNDAKDIKEIISEVDSDNDGRINYDEFVAMMKKGNPEAARNAKKRREVFVE

Transcript Sequence

Gene sequence data has not been registered.